miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|51540286|gb|CV073255.1|CV073255 GGAACAGCAGGGGGAGGAGGGTCGGGTTACAGCCAATAGCTCAGTTTTCTTTCAACTGTAGCGGAACCTCCGAGCCTTGG
GTGGCGCTGTAGGCAGGCAGGAGTGAGTGCATGTGGATATATTCCCCTGCATATAGCTTTCGTGGGATCAGTCGTGAGCT
TCTCTCTTCTTGCAAACATGGCACTGCTGAAGTCTCGGCTCCTTGTTGGAGTGGCTCGTTGCCAGCCCTGCTTGGCTGTG
GTACAGGGCAGAGCAAGCTCCTGGTGGTCTCATGTTGAGATGGGCCCACCTGATCCAATTCTGGGTGTGACAGAAGCTTT
TAAACGTGACACTAACCCCAAGAAGATGAACTTGGGTGTGGGAGCTTATCGGGATGANCATGGCAAACCTTATGTCCTAA
GCATTGTGCGTAAAGCTGAGGCTCAGTTGGCATCAAAAAATCTGGATTAAGAATATCTGCTTATGGAAGCCTGGCCAAAA
TTGGCCCGGCCATCCGCACATTGGACCTTGTGAAAATTGGGACCTTTTAAAAATGAACGTTTATTACTGGACAACATTTC
GGAAACGATTCTTCCAAATGAACCAATTTTTGGCAAATTCAAATCAACCCGGGGTTTACCGCCAAAACTCCGGGGATCCA
C




Most similar to sp|Q28F67|AATM_XENTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q28F67|AATM_XENTR Aspartate aminotransferase, mitochondrial
           OS=Xenopus tropicalis GN=got2 PE=2 SV=1
          Length = 427

 Score =  183 bits (464), Expect = 9e-46
 Identities = 93/111 (83%), Positives = 96/111 (86%)
 Frame = +1

Query: 178 MALLKSRLLVGVARCQPCLAVVQGRASSWWSHVEMGPPDPILGVTEAFKRDTNPKKMNLG 357
           MALLKSRLLVGVARCQPCLA VQGRASSWWSHVEMGPPDPILGVTEAFKRDTN KKMNLG
Sbjct: 1   MALLKSRLLVGVARCQPCLAAVQGRASSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLG 60

Query: 358 VGAYRDXHGKPYVLSIVRKAEAQLASKNLD*EYLLMEAWPKLARPSAHWTL 510
           VGAYRD +GKPYVLS VRKAEAQLASKNLD EYL +    + AR SA   L
Sbjct: 61  VGAYRDDNGKPYVLSSVRKAEAQLASKNLDKEYLPIGGLAEFARASAQLAL 111